In clinical practice, routine microbiologic identification of pathogens utilizes
selective media which favors the growth of suspected pathogens.
recommended for patients with one of the following: acute diarrhea that is severe or
associated with a temperature >38.5°C; dysentery—which is an inflammatory
diarrheal illness characterized by bloody or mucoid stools with abdominal cramps;
profuse cholera-like watery diarrhea; dehydration; elderly or immunocompromised
patients; nursing home patients; food handlers; and day-care workers.
patients should be evaluated for C. difficile infection. Culture of specimens from
extraintestinal sites of infection (e.g., blood cultures) can be used to identify the
PCR-based diagnostic tests are widely available in industrialized countries,
offering improved sensitivity but focusing on genes versus virulence factors.
Drug therapy for infectious diarrhea includes medications to provide symptomatic
relief or to eradicate the causative pathogen.
LOPERAMIDE AND DIPHENOXYLATE/ATROPINE
Loperamide and diphenoxylate/atropine reduce the frequency of diarrheal stools by
slowing intestinal transit time; additionally, loperamide possesses antisecretory
8 Loperamide is preferred over diphenoxylate/atropine because of its
greater efficacy, better tolerance, and over-the-counter availability.
Diphenoxylate/atropine causes drowsiness, dizziness, dry mouth, and urinary
retention owing to the atropine component, and its use in the elderly is not
recommended (see Chapter 107 Geriatric Drug Use).
The use of antimotility drugs is not recommended in persons with fever, bloody
3 or when invasive pathogens are suspected.
prolongation of clearance of pathogens from the intestinal tract could worsen the
severity of illness. However, in non-critically ill patients with bacillary dysentery,
loperamide was not harmful when administered with antimicrobials to which the
infecting pathogen was susceptible.
Bismuth subsalicylate’s antidiarrheal properties are because of its antisecretory,
adsorbent, and antimicrobial properties.
10 Problems with BSS include the
inconvenience of dosing 4 times per day, and adverse effects such as darkening of the
tongue and stools, and tinnitus secondary to salicylate absorption. Each
recommended antidiarrheal dose of BSS of 526 mg contains 263 mg of salicylate,
and this needs to be considered in patients already taking salicylate products.
HIV-infected persons on antiretroviral therapy.
Its antisecretory effect is because of
the unique inhibition of two distinct channels responsible for chloride and fluid
secretion into the GI tract. Crofelemer improves diarrheal symptoms in patients with
noninfectious diarrhea; larger trials are needed to further assess its efficacy and
safety in patients with infectious diarrhea. Common side effects of cofelemer include
flatulence (7%) and abdominal pain (5%).
Interest in probiotics stems, in part, from their potential to decrease the use of
antibiotics. These live microbial mixtures of bacteria and yeasts are used to restore
the normal intestinal flora, thereby reducing intestinal colonization with pathogenic
organisms. Probiotics also produce pathogen-inhibiting substances, prevent pathogen
adhesion to the GI tract, inhibit the action of microbial toxins, and stimulate immune
12 Further studies are needed to clarify the role of specific
probiotics for the treatment and prevention of acute infectious diarrhea.
In selected cases, antimicrobials are prescribed to decrease the duration and the
severity of diarrheal illnesses, to prevent the progression to invasive infection, and
prevent person-to-person transmission of pathogens. Antimicrobials are generally
recommended for the severely ill, for patients with conditions compromising normal
enteric defenses, for immunocompromised patients, and for the treatment of
Ongoing surveillance of antimicrobial resistance is important to guide treatment
recommendations. Extensively used in the past and resulting in widespread resistance
to common enteropathogens, trimethoprim–sulfamethoxazole (TMP–SMX), the
aminopenicillins, nalidixic acid, and tetracyclines are unsuitable empiric choices for
the treatment of many enteropathogens. Depending on the circumstances surrounding
the diarrheal illness, including where the pathogen was acquired (e.g., domestic vs.
travel-related), age, and allergy history of the patient, commonly recommended
antimicrobials include selected third-generation cephalosporins (e.g., ceftriaxone or
cefotaxime), azithromycin, rifaximin, fluoroquinolones, and others.
The fluoroquinolones, although still recommended because of their efficacy against
3 and their availability as oral formulations, must be used
cautiously as common enteropathogens, e.g., Shigella, Salmonella, and
Campylobacter species, are frequently fluoroquinolone-resistant.
consideration with using fluoroquinolones is that they are not FDA-approved for use
in children because lesions on cartilage tissue have been reported in juvenile
animals. Nevertheless, because of the emergence of multidrug-resistant
enteropathogens in some geographic areas, clinical trials using fluoroquinolones in
15 and the available data suggest that a short course of
these agents is safe. Finally, antimicrobial use should be limited to instances where
their benefits outweigh their risks for adverse effects and resistance.
Good personal hygiene along with proper food handling, cooking, and storage are
essential to prevent the spread of enteropathogens. When visiting areas with
inadequate facilities for the disposal of sewage, travelers should follow the rule,
“boil it, cook it, peel it, or forget it.” Effective vaccines are available to prevent
typhoid fever, rotavirus, and cholera (not available in the United States); studies of
vaccines to prevent Campylobacter, enterotoxigenic E. coli, and Shigella infections
EVALUATION AND TREATMENT OF PATIENTS
raw oysters at a localseafood restaurant 2 days ago, and he has
general approach to the management of B.K.’s diarrheal illness?
Because infectious diarrhea is typically a self-limiting illness, patients may never
seek medical attention, and in many cases, replacement of fluids and electrolytes is
all that is required. In general, medical evaluation is warranted for patients with
profuse watery diarrhea with dehydration, bloody stools, temperature greater than
101.3°F, or illness of more than 48 hours duration. Other persons requiring medical
evaluation include patients older than 50 years of age with severe abdominal pain
and immunocompromised patients (e.g., those with acquired immunodeficiency
syndrome, organ transplant recipients, or patients being treated with cancer
chemotherapies). Noninfectious causes for the illness such as medications,
inflammatory bowel disease, consumption of poorly absorbable carbohydrates (e.g.,
sugarless candies or chewing gum), or malabsorption syndromes should be
CASE 69-1, QUESTION 2: What rehydration plan would you recommend for B.K.?
B.K.’s physical examination is significant for decreased skin turgor and dry
mucous membranes, findings consistent with mild-to-moderate volume depletion.
Given that B.K. is not “toxic” appearing, with stable vital signs, and is tolerating oral
liquids, oral beverages containing glucose (e.g., lemonades, sweet sodas, or fruit
juices) or soups rich in electrolytes are appropriate.
significant reductions in dehydration-related mortality is attributed to oral
replacement therapy solutions containing optimal concentrations of sodium,
potassium, chloride, bicarbonate, and glucose; the glucose content of these solutions
is responsible for accelerating the absorption of sodium.
Intravenous replacement therapy is warranted for severe dehydration—
characterized by lethargy, very sunken and dry eyes, a very dry tongue and mouth, a
pulse that is fast, weak or non-palpable, poor urine output, and low blood pressure—
or for persons with intestinal ileus or who are unable to drink on their own.
CASE 69-1, QUESTION 3: How does B.K.’s clinical presentation as a noninflammatory versus
inflammatory diarrheal illness help to guide further treatment?
The clinical presentation (e.g., the specific symptoms, the severity and duration of
symptoms), along with the history of present illness (e.g., risk factors for infection),
allows for classification of diarrheal syndromes as noninflammatory versus
inflammatory illnesses. Such a classification allows the physician to consider a more
focused list of potential enteropathogen(s), and based on the list of suspected
organisms, a diagnostic and therapeutic plan can be developed.
B.K.’s history of present illness and clinical presentation are consistent with a
noninflammatory diarrheal illness. Voluminous, watery, non-bloody diarrhea is
characteristic of pathogens targeting the small bowel, which is responsible for
absorption of most fluids entering the GI tract.
7 The clinical manifestations of
noninflammatory, watery diarrheal illnesses are a consequence of bacterial
enterotoxins that promote the secretion of water and electrolytes into the intestinal
lumen; or of viruses infecting and damaging the absorptive villus tips, resulting in
7 Like B.K., patients with noninflammatory diarrheal
illnesses are not severely ill, are afebrile and without significant abdominal pain
most patients require only supportive therapies. Noninflammatory diarrheas are
typically caused by viruses (e.g., rotaviruses and noroviruses), bacteria (e.g.,
Staphylococcus aureus, Bacillus cereus, and Clostridium perfringens), or parasites
(e.g., Cryptosporidium parvum and Giardia lamblia).
In contrast, inflammatory diarrheas are generally a more severe illness
characterized by diarrhea with or without dysentery, abdominal pain, and fever.
Pathogens targeting the distal small bowel and colon disrupt the epithelial barrier,
causing the bloody or mucoid stools.
In addition to supportive therapies, selected
persons with inflammatory diarrheal illnesses may benefit from antimicrobial therapy
directed at the causative pathogen. The clinical manifestations of inflammatory
diarrheal illnesses are a consequence of the production of cytotoxins (e.g., as
produced by C. difficile, Shiga toxin–producing E. coli, and enteroaggregative E.
coli), or of the pathogen’s ability to invade the intestinal mucosa (e.g.,
Campylobacter jejuni, Shigella species, and Salmonella species).
Clinical Presentation and Treatment
CASE 69-1, QUESTION 4: B.K.’s stool is negative for WBCs and RBCs. With B.K.’s history of dining at
Noroviruses are responsible for major outbreaks of foodborne viral illnesses in
harvested from contaminated waters and other contaminated foods (e.g. salads,
sandwiches), by person-to-person contact, or by exposure to contaminated
recreational waters. Like B.K., within 12 to 48 hours after exposure to the virus,
patients complain of nausea, vomiting, diarrhea, and abdominal cramps. B.K. will
likely experience a mild intestinal illness lasting 1 to 3 days. Supportive therapies to
correct fluid and electrolyte losses and to replace ongoing losses are the mainstay of
treatment for viral gastroenteritis. Preventing future outbreaks will require the
restaurant to ensure proper food-handling practices.
Other common causes of viral gastroenteritis are rotaviruses and astroviruses
which are responsible for 30% to 60% of all cases of severe, watery diarrhea in
children. After an incubation period of 1 to 3 days, patients experience fever,
vomiting, and non-bloody, watery diarrhea; otherwise healthy persons are typically
In the United States, two oral rotavirus vaccines are available for the prevention of
rotavirus gastroenteritis in infants and children, a pentavalent (three-dose series) and
(two-dose series). Vaccine effectiveness in high and upper middle income
countries ranges from 79% to 100%, with the benefit of vaccination outweighing
vaccine risks, e.g., intussusception (when a part of the intestine folds into another
adjacent part of the intestine, referred to as “telescoping,” which can lead to
20 As rotaviruses are spread by the fecal–oral route, proper
hand washing and disposal of contaminated items are essential to limit the spread of
Vibrio species are curved gram-negative rods whose natural habitats are the
environmental waters throughout the world. V. cholerae 01 and 0139 are noninvasive
enteropathogens responsible for epidemic cholera in humans. The ongoing seventh
cholera pandemic began in 1961, subsequently spreading through Asia to Africa,
5 Prevention of cholera relies on the provision of safe
drinking water and adequate sanitation. Cholera vaccines are not routinely
incorporated into cholera control efforts, in part related to financial and logistical
5 Non-cholera Vibrio species (e.g., Vibrio parahaemolyticus) do not possess
the virulence factors required to cause epidemic cholera but do cause gastroenteritis,
wound infections, and in susceptible hosts, fulminant sepsis.
RISK FACTORS AND CLINICAL PRESENTATION
which he takes a proton-pump inhibitor.
cholera and why is his clinical presentation consistent with this diagnosis?
M.M. has two risk factors to explain his presumed diagnosis of cholera. First, he has
just returned from Haiti, a county suffering from epidemic cholera following a major
earthquake in 2010 that severely damaged public health facilities.
countries, cholera has been virtually eliminated because of modern sewage and water
treatment systems. However, sporadic cases, like M.M., occur in travelers returning
from areas where cholera is epidemic or endemic, or from the consumption of
contaminated and undercooked seafood (e.g., improperly preserved fish, raw oysters,
and shellfish) from waters off the Gulf Coast States or imported from endemic
22 Second, M.M.’s daily use of a proton-pump inhibitor reduces his stomach’s
acidity, thus allowing the acid-susceptible V. cholerae to pass from the stomach into
Cholera epidemics are caused by toxin-producing strains of V. cholerae 01 or 0139.
The characteristic voluminous, watery, and colorless stools with “white flecks” of
mucus (referred to as rice-water stools because of their similarity to the appearance
of water after washing rice) are caused by the cholera toxin which promotes the
intestinal secretion of fluids and electrolytes.
The severity of cholera and likelihood of infection is influenced by host factors
and the setting in which it occurs.
5 Severe disease is more common in previously
unexposed persons like M.M. who are immunologically naïve (e.g. epidemic
cholera), while less severe disease occurs in areas where cholera is endemic.
Following ingestion of contaminated foods, a watery diarrheal illness begins within
12 hours to 5 days and may progress to life-threatening dehydration.
CASE 69-2, QUESTION 2: What are the signs and symptoms suggesting M.M. is severely dehydrated, and
how should his dehydration be treated?
M.M. is one of the 2% to 5% of persons with V. cholerae infection who
experience severe dehydration (≥10% dehydration), losing up to 1 L/hour of fluid,
and whose condition may, within hours, progress to hypovolemic shock and death.
M.M. shows signs of severe dehydration as manifested by his altered mental status,
sunken eyes, poor skin turgor, dry mucous membranes, low blood pressure, and
5 Acidosis may occur as a result of massive bicarbonate losses
through diarrheal stools, and it may be exacerbated by lactic acidosis from shock and
5 M.M. should receive vigorous IV hydration with
Ringer’s lactate solution to replace the large quantities of sodium, potassium, and
bicarbonate lost through his watery stools; his muscle weakness could be attributed
to depletion of electrolytes, specifically potassium and calcium.
blood pressure and normalization of heart rate are critical interventions.
Once M.M. is able to drink fluids, oral hydration can be started, even with ongoing
IV hydration. Oral replacement solutions containing less than 75 mEq/L of sodium
are inappropriate because of the large amounts of sodium lost through cholera
5 Oral rehydration solutions can be made by mixing together one-half teaspoon
salt, six teaspoons sugar and 1 liter of safe water.
CASE 69-2, QUESTION 3: Would M.M. benefit from the administration of antimicrobials, and what
antimicrobial treatment options are available?
Antimicrobials are recommended for patients with moderate-to-severe
dehydration from cholera infection.
5 Effective antimicrobial therapy decreases the
volume of diarrheal losses, shortens the duration of illness by up to 50% and reduces
the period of shedding infectious organisms from >5 days
Antimicrobials should be administered after the initial fluid deficit has been
corrected and if applicable, after vomiting has resolved.
If susceptible, the following single- and multiple-dose regimens are effective
treatments for V. cholerae ; single-dose regimens are preferred because of their ease
of administration, and compared to multiple doses of erythromycin, they are better
Adults: doxycycline 300 mg orally × 1 dose, or azithromycin 1 g orally × 1 dose, or
ciprofloxacin 500 mg orally twice a day for 3 days,
5 or tetracycline 500 mg orally
every 6 hours for 3 days, or erythromycin 250 mg orally 4 times daily for 3 days.
TMP–SMX resistance precludes its empiric use for the treatment of cholera.
Children: ciprofloxacin 15 mg/kg/dose orally twice a day × 3 days, or azithromycin
20 mg/kg orally × 1 dose, or erythromycin 12.5 mg/kg/dose orally every 6 hours
for 3 days. Pediatric doses should not exceed maximum adult doses.
For M.M., a single 300 mg oral dose of doxycycline is a good empiric choice as
the strain of V. cholerae circulating in Haiti is currently susceptible to tetracycline
(indicative of susceptibility to doxycycline).
23 Empiric ciprofloxacin is not
recommended because the circulating strain in Haiti has reduced susceptibility to
ciprofloxacin which is associated with lack of clinical and microbiologic
25 Additionally, until M.M. has recovered from this cholera infection,
he should refrain from taking his proton-pump inhibitor which, by reducing his
stomach’s acidity, allows the acid-susceptible V. cholerae to pass from the stomach
QUESTION 1: C.T. is a 45-year-old man presenting to his physician with 1 day of non-bloody, watery
with non-cholera Vibrio gastroenteritis?
A key piece of information from C.T.’s history of present illness consistent with
the presumptive diagnosis of non-cholera Vibrio gastroenteritis is consumption of
raw oysters harvested from the coastal areas of Florida, where V. parahaemolyticus
species have been identified. Diarrhea, abdominal cramps, nausea, vomiting, and
fever begin after a median incubation period of 17 hours (range, 4–90 hours); bloody
diarrhea occurs in 9% to 29% of cases.
CASE 69-3, QUESTION 2: Should a course of antibiotics be prescribed for C.T.?
In otherwise healthy adults like C.T., V. parahaemolyticus gastroenteritis is usually
a mild, self-limiting illness lasting for a median of 2 to 6 days.
support the benefit of antibiotics in this setting, although patients with diarrhea lasting
longer than 5 days may benefit from treatment with tetracycline or a fluoroquinolone;
minocycline 100 mg orally every 12 hours and cefotaxime 2 g IV every 8 hours have
Individuals with liver disease or alcoholism are at risk for severe Vibrio
infections including septicemia
; such individuals should avoid eating raw or
undercooked shellfish, and avoid exposure of open wounds to seawater especially
during the warmer months when water temperatures favor the growth of Vibrio
STAPHYLOCOCCUS AUREUS, BACILLUS
CEREUS, AND CLOSTRIDIUM PERFRINGENS
S. aureus, B. cereus, and C. perfringens are important causes of toxin-mediated
foodborne illnesses. Gastrointestinal symptoms typically begin within 24 hours after
the ingestion of contaminated foods, which is in contrast to the longer incubation
periods for illnesses caused by Salmonella, Shigella, and Campylobacter species. B.
cereus causes two different intestinal syndromes: the short-incubation disease
characterized by vomiting and a long-incubation disease characterized by a diarrheal
Clinical Presentation and Treatment
Foodborne illnesses are often grouped by their usual incubation period: less than 6
hours, 8 to 16 hours, and greater than 16 hours.
26 The rapid onset (within 6 hours) of
S.A.’s intestinal symptoms after eating suggests the illness is caused by preformed
toxins, such as those produced by S. aureus or B. cereus (short-incubation disease,
emetic syndrome). Diarrhea and abdominal cramps may also occur. Although
cooking kills the toxin-producing bacteria, it does not destroy toxin that has already
been produced. Foods implicated in staphylococcal food poisoning include salads,
cream-filled pastries, and meats, whereas foods implicated in B. cereus food
poisoning include fried rice, dried foods, and dairy products.
prescribed to either of these students?
In contrast to S.A., the longer incubation period before the onset of symptoms is
consistent with illness caused by C. perfringens or B. cereus (long-incubation
disease, diarrheal syndrome). These bacteria are associated with an incubation
period of 8 to 16 hours and symptoms of diarrhea and abdominal cramps; vomiting is
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